I’m just a guy with some high levels of curiosity about tech/science stuff.

Started studying Python and R for bioinformatics in 2014. Since then, I’ve played with a lot of cool stuff! From bioinformatics pipelines to web applications, from R packages to Docker, from statistical learning to container clusters in the cloud.

Here is my resume! :nerd_face:

R Packages

  • rworker: Celery worker for R tasks!
  • rabbitr: RabbitMQ client library for R.
  • CEMiTool Gene co-expression analyses made easy.

Python packages

  • bioboard: Interactive dashboard for bioinformaticians.
  • spots: Read and analyse Google location history.

Web

Presentations

Publications

  • CARDOZO, LUCAS E.; RUSSO, PEDRO S. T.; GOMES-CORREIA, BRUNO; ARAUJO-PEREIRA, MARIANA; SEPÚLVEDA-HERMOSILLA, GONZALO; MARACAJA-COUTINHO, VINICIUS; NAKAYA, HELDER I.. webCEMiTool: Co-expression Modular Analysis Made Easy. Frontiers in Genetics, 2019.
  • SILVA, MARIA C. ; DAVOLI-FERREIRA, MARCELA ; MEDINA, TIAGO S. ; SESTI-COSTA, RENATA ; SILVA, GRACE K. ; LOPES, CARLA D. ; CARDOZO, LUCAS E. ; GAVA, FÁBIO N. ; LYRONI, KONSTANTINA ; DIAS, FABRÍCIO C. ; FRADE, AMANDA F. ; BARON, MONIQUE ; NAKAYA, HELDER I. ; FIGUEIREDO, FLORÊNCIO ; ALVES-FILHO, JOSÉ C. ; CUNHA, FERNANDO Q. ; TSATSANIS, CHRISTOS ; CHEVILLARD, CHRISTOPHE ; CUNHA-NETO, EDECIO ; HIRSCH, EMILIO ; SILVA, JOÃO S. ; CUNHA, THIAGO M. . Canonical PI3Kγ signaling in myeloid cells restricts Trypanosoma cruzi infection and dampens chagasic myocarditis. Nature Communications, v. 9, p. 1513, 2018.
  • RUSSO, PEDRO S. T. ; FERREIRA, GUSTAVO R. ; CARDOZO, LUCAS E. ; BÜRGER, MATHEUS C. ; ARIAS-CARRASCO, RAUL ; MARUYAMA, SANDRA R. ; HIRATA, THIAGO D. C. ; LIMA, DIÓGENES S. ; PASSOS, FERNANDO M. ; FUKUTANI, KIYOSHI F. ; LEVER, MELISSA ; SILVA, JOÃO S. ; MARACAJA-COUTINHO, VINICIUS ; NAKAYA, HELDER I. . CEMiTool: a Bioconductor package for performing comprehensive modular co-expression analyses. BMC Bioinformatics, v. 19, p. 1-56, 2018.
  • DE OLIVEIRA, ÉRICA APARECIDA ; DE LIMA, DIOGENES SAULO ; CARDOZO, LUCAS ESTEVES ; DE SOUZA, GARCIA FERREIRA ; DE SOUZA, NAYANE ; ALVES-FERNANDES, DEBORA KRISTINA ; FAIÃO-FLORES, FERNANDA ; PABLO QUINCOCES, JOSÉ AGUSTÍN ; DE MORAES BARROS, SILVIA BERLANGA ; NAKAYA, HELDER I. ; MONTEIRO, GISELE ; MARIA-ENGLER, SILVYA STUCHI . Toxicogenomic and bioinformatics platforms to identify key molecular mechanisms of a curcumin-analogue DM-1 toxicity in melanoma cells. Pharmacological Research, p. 178-187, 2017.

Miscelaneous

For those who believe that “you are what you listen to”, here goes my list of favourite podcasts:

If you believe “you are what you read”, here is a list of the aggregators that I commonly use: